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Immunoassays for autoimmune research

Published: June 25, 2025

5 minute read

Authored by: Jens Gertow

Autoimmune diseases are among the most enigmatic and challenging disorders in immunology. Here, the immune system – normally our most loyal defender – mistakenly identifies our own tissues as threats. Whether it's the joints in rheumatoid arthritis, the pancreas in type 1 diabetes, or the gut in Crohn's disease, the result is chronic inflammation and tissue damage. Understanding these self-reactive immune responses is not only crucial for diagnostics, but also for developing better, more targeted treatments.

At Mabtech, we provide researchers with the tools to visualize and quantify these autoimmune responses. From single-cell resolution to high-throughput multiplex analysis, our immunoassay platforms – ELISpot, FluoroSpot, ELISA PathRF, and EYRAplex – give scientists unmatched insight into the immune dynamics of autoimmune disease.

Pinpoint autoreactive cells with FluoroSpot

The key to dissecting autoimmune disease lies in understanding which cells are active, what they’re secreting, and how those responses change over time. ELISpot and FluoroSpot allow you to:

Let’s take multiple sclerosis (MS) as an example. In MS, autoreactive T cells cross the blood–brain barrier and attack the myelin sheath protecting neurons. Using FluoroSpot, researchers can monitor IFN-γ, IL-17A, and GM-CSF production in response to self-antigens such as myelin oligodendrocyte glycoprotein (MOG) peptides. The resulting data can uncover the balance between inflammatory Th1/Th17 responses and regulatory T cell activity – critical for understanding disease progression or response to therapy (Lalive et al., Front. Immunol. 2017; Reynier et al., Cells 2021).

Recent studies have shown how novel myelin-derived autoantigens can be identified with FluoroSpot, and how EBV cross-reactivity may play a role in MS development.

FluoroSpot also allows researchers to explore novel autoantigens – those elusive proteins that may trigger immune responses in diseases like MS. With the right stimulation and analytical precision, new disease mechanisms can be uncovered and fresh therapeutic targets brought to light.

Multiple sclerosis

Top: Healthy neuron
Bottom: Nerve affected by autoantibodies

Pain in joints

Similarly, in type 1 diabetes, FluoroSpot can be used to track responses to insulin or GAD65 peptide pools, assessing how T cell functionality evolves pre- and post-intervention (Kent et al., Diabetes 2005; Coppieters et al., JCI Insight 2016).

Finally, in patients with autoimmune disorders who contract COVID-19, FluoroSpot has been used to characterize SARS-CoV-2-specific immune responses and how they differ from healthy controls.

To make the journey from hypothesis to data smoother than ever, our IRIS™ 2 and ASTOR™ 2 readers remove the complexity from analysis. These next-generation instruments ensure high sensitivity, minimal variability, and maximum confidence – qualities that have made IRIS a featured tool in MS studies.

Heterophilic antibodies? No problem

Autoimmune diseases often involve elevated levels of heterophilic antibodies, like rheumatoid factor, which can interfere with immunoassays. Our ELISA PathRF kits are specially designed to counteract heterophilic interference, using tailored diluents that block false signals. So when analyzing samples from RA or lupus patients, you can trust your results reflect real biology – not artifact (Kricka, Clin Chem 1999; Ismail et al., J Immunol Methods 2020).

PathRF is especially useful for clinical samples where conventional ELISAs struggle. The kits are optimized for human serum and plasma, making them ideal for autoimmune research that involves cytokine detection, biomarker validation, or comparative studies across patient cohorts.

ELISA PathRF assay principle

A) Principle of a sandwich ELISA.
B) Interference by heterophilic antibodies and rheumatoid factor (RF) causing a false-positive signal.
C) Circumventing interference with an ELISA PathRF kit. ​

Multiplex profiling of autoimmune signatures

For broader profiling of soluble biomarkers, our EYRAplex system lets you quantify over 40 analytes in a single sample. With panels covering Th1, Th2, Th17, Treg, and proinflammatory cytokines, EYRAplex is ideal for:

  • Screening for cytokine signatures in autoimmune patient samples

  • Monitoring treatment response

  • Identifying novel disease-associated pathways

Thanks to our novel buffer system and use of recombinant mAbs, EYRAplex avoids false positives caused by heterophilic antibodies – a common concern in autoimmune serum samples.

Image of the EYRAplex kit and all its components

A tool for every stage

Autoimmune diseases are complex, dynamic, and deeply personal. Each patient’s immune landscape is different. That’s why resolution matters – whether you're working at the single-cell level or scanning broad cytokine panels. For this reason, we offer:

  • ELISpot kits to detect rare autoreactive cells at single-cell resolution

  • FluoroSpot kits to detect multiple cytokines from autoreactive cells in a single assay

  • ELISA PathRF kits for reliable, interference-free quantification

  • EYRAplex kits for broad, multiplex autoimmune biomarker profiling

With Mabtech's full suite of immunoassays, you have the tools you need to see deeper, measure more accurately, and ultimately, make better decisions. From hypothesis to publication, we’re with you every step of the way.

 

 

References

  • Lalive et al., Increased interleukin-22 and Th17 cytokines in multiple sclerosis patients, Front. Immunol. 2017

  • Reynier et al., Myelin peptide-reactive T cells in multiple sclerosis: functional characterization and impact on disease activity, Cells 2021

  • Kent et al., Expansion of autoreactive CD8+ T cells in type 1 diabetes, Diabetes 2005

  • Coppieters et al., Demonstration of islet-autoreactive CD8 T cells in insulitic lesions from recent onset and long-term type 1 diabetes patients, JCI Insight 2016

  • Ehrenstein et al., Anti-cytokine autoantibodies in autoimmune disease and COVID-19: pathogenesis and therapeutic implications, Nature Rev Rheumatol 2021

  • Kricka, Interferences in immunoassay – still a threat, Clin Chem 1999

  • Ismail et al., Strategies to minimize interference by heterophilic antibodies in immunoassays, J Immunol Methods 2020


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Highlighted research MultiplexELISAELISpotFluoroSpotAutoimmunitymultiple sclerosistype 1 diabetesrheumatoid arthritis